Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HGFACHGF activator. (602 aa)    
Predicted Functional Partners:
LOC101169766
Serpin peptidase inhibitor, clade G (C1 inhibitor), member 1; Belongs to the serpin family.
   
 0.942
spint1
Serine peptidase inhibitor, Kunitz type 1 a.
    
 0.888
c1qbp
Complement component 1, q subcomponent binding protein.
    
  0.845
LOC101170553
NME/NM23 family member 8; Belongs to the NDK family.
    
 0.818
ENSORLP00000029802
Uncharacterized protein.
    
 0.786
LOC101175207
Serine peptidase inhibitor, Kunitz type 1 a.
    
 0.786
ENSORLP00000031792
MANSC domain-containing protein.
    
 0.786
stil
SERPIN domain-containing protein; Belongs to the serpin family.
   
 0.772
Wdr90
WD_REPEATS_REGION domain-containing protein.
   
 0.758
ENSORLP00000042816
Uncharacterized protein.
   
 0.758
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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