STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mybpc3Myosin binding protein C, cardiac. (1248 aa)    
Predicted Functional Partners:
MYL2
Myosin, light chain 2b, regulatory, cardiac, slow.
   
 0.688
MYL2-2
Myosin light chain 2.
   
 0.654
LOC100125526
Myosin heavy chain 7; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.654
TPM1
Uncharacterized protein; Belongs to the tropomyosin family.
   
 0.594
prkag2
Protein kinase, AMP-activated, gamma 2 non-catalytic subunit a.
   
 
 0.588
wdr18
WD repeat domain 18.
   
 0.587
H2LWG8_ORYLA
Troponin I type 1a (skeletal, slow).
   
 
 0.572
tex10
Testis expressed 10.
   
 0.548
pes1
Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.503
LOC101159505
Titin-cap (telethonin).
   
 0.492
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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