STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101157595Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1911 aa)    
Predicted Functional Partners:
LOC101167500
Myosin, light chain 1, alkali; skeletal, fast.
   
 0.974
H2MTE5_ORYLA
Myosin, light chain 13.
   
 0.971
MYL2
Myosin, light chain 2b, regulatory, cardiac, slow.
   
 0.968
MYL2-2
Myosin light chain 2.
   
 0.968
H2LQV6_ORYLA
Uncharacterized protein.
   
 0.965
LOC101160287
Uncharacterized protein.
   
 0.956
LOC101167032
Myosin, light chain 9a, regulatory.
   
 0.949
LOC101159052
Uncharacterized protein.
   
 0.948
LOC101172386
EF-hand domain-containing protein.
   
 0.948
LOC101165346
Uncharacterized protein.
   
 0.948
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.