Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
znfx1Zinc finger, NFX1-type containing 1. (1904 aa)    
Predicted Functional Partners:
mavs
CARD_2 domain-containing protein.
     
  0.900
ifih1
Interferon induced with helicase C domain 1.
   
  
 0.724
LOC101156100
Uncharacterized protein; Belongs to the argonaute family.
    
 
 0.720
LOC101165653
Uncharacterized protein; Belongs to the argonaute family.
    
 
 0.720
LOC101167465
Protein argonaute-4; Required for RNA-mediated gene silencing (RNAi). Binds to short RNAs such as microRNAs (miRNAs) and represses the translation of mRNAs which are complementary to them. Lacks endonuclease activity and does not appear to cleave target mRNAs; Belongs to the argonaute family. Ago subfamily.
    
 
 0.720
LOC101157320
Argonaute RISC catalytic component 3a; Belongs to the argonaute family.
    
 
 0.720
LOC101169483
Argonaute RISC component 1; Belongs to the argonaute family.
    
 
 0.720
hnrnpr
Heterogeneous nuclear ribonucleoprotein R.
    
   0.711
syncrip
Synaptotagmin binding, cytoplasmic RNA interacting protein, like.
    
   0.711
LOC101169504
Synaptotagmin binding, cytoplasmic RNA interacting protein.
    
   0.711
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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