Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101168390Purine-rich element binding protein Aa. (285 aa)    
Predicted Functional Partners:
hsp70-5
Uncharacterized protein; Belongs to the heat shock protein 70 family.
      
 0.600
hsp70-3
Uncharacterized protein; Belongs to the heat shock protein 70 family.
      
 0.600
LOC101169378
RNA binding motif protein 4.1.
    
 
 0.582
LOC101164014
Adenosine deaminase RNA specific B2 (inactive).
      
 0.546
e2f1
E2F transcription factor 1.
    
 
 0.534
PURB
Purine rich element binding protein B.
   
   0.520
LOC101169999
Uncharacterized protein.
   
   0.520
zcrb1
Zinc finger CCHC-type and RNA binding motif 1.
    
 
 0.513
hnrnpa3
Heterogeneous nuclear ribonucleoprotein A3.
    
 
 0.513
LOC101164090
Si:cabz01093077.1; Belongs to the G-protein coupled receptor 1 family.
      
 0.508
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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