Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC101167866Bestrophin homolog; Forms chloride channels; Belongs to the bestrophin family. (704 aa)    
Predicted Functional Partners:
glul
Glutamine synthetase.
    
 
 0.693
tmem98
Transmembrane protein 98.
      
 0.615
rpe65
Retinoid isomerohydrolase RPE65 a.
      
 0.576
prss56
Serine protease 56; Belongs to the peptidase S1 family.
      
 0.562
LOC101163918
Glutamine synthetase.
    
 
 0.546
rlbp1
Retinaldehyde binding protein 1b.
   
  
 0.537
pelo
Protein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs.
 
      0.528
AXL
AXL receptor tyrosine kinase.
      
 0.523
LOC101168054
Recoverin 3.
   
  
 0.505
eys
Uncharacterized protein.
   
  
 0.502
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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