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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2LNT6_ORYLARab interacting lysosomal protein-like 2. (187 aa)    
Predicted Functional Partners:
rab10
RAB10, member RAS oncogene family.
   
 
 0.722
RAB8A
RAB8A, member RAS oncogene family.
   
 
 0.660
LOC101170877
RAB8A, member RAS oncogene family.
   
 
 0.660
LOC101162740
Uncharacterized protein.
   
 
 0.660
rab8b
Multiple EGF-like-domains 8.
   
 
 0.660
garem1
GRB2 associated, regulator of MAPK1.
   
 
 0.659
garem2
GRB2 associated, regulator of MAPK1-like.
   
 
 0.659
LOC101168905
RAB15, member RAS oncogene family.
   
 
 0.657
rab13
Uncharacterized protein.
   
 
 0.657
rab15
RAB15, member RAS oncogene family.
   
 
 0.657
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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