STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tacr3Tachykinin receptor 3a; Belongs to the G-protein coupled receptor 1 family. (412 aa)    
Predicted Functional Partners:
tac3
Tachykinin 3.
    
 0.992
tac1
Uncharacterized protein.
    
 0.896
LOC101168718
Uncharacterized protein.
    
 0.783
LOC101168962
Guanine nucleotide binding protein (G protein), alpha 14a.
    
 0.783
LOC101161353
Guanine nucleotide binding protein (G protein), alpha 11b (Gq class).
    
 0.783
LOC101157684
Guanine nucleotide binding protein (G protein), alpha 15 (Gq class), tandem duplicate 4.
    
 0.732
LOC101167719
Uncharacterized protein.
    
 0.720
sdhaf3
Succinate dehydrogenase complex assembly factor 3.
    
 0.622
prok2
Prokineticin 2.
     
 0.511
LOC101170514
Zinc finger protein 385A.
      
 0.504
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.