Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tacr3Tachykinin receptor 3a; Belongs to the G-protein coupled receptor 1 family. (412 aa)    
Predicted Functional Partners:
tac3
Tachykinin 3.
    
 0.997
LOC101168718
Uncharacterized protein.
    
 0.936
LOC101161353
Guanine nucleotide binding protein (G protein), alpha 11b (Gq class).
    
 0.936
LOC101158934
Guanine nucleotide binding protein (G protein), alpha 11a (Gq class).
    
 0.936
tac1
Uncharacterized protein.
    
 0.932
LOC101167719
Uncharacterized protein.
    
  0.920
LOC101168962
Guanine nucleotide binding protein (G protein), alpha 14a.
    
 0.779
LOC101157684
Guanine nucleotide binding protein (G protein), alpha 15 (Gq class), tandem duplicate 4.
    
  0.723
gnrh3
GnRH-associated peptide 3; Stimulates the secretion of gonadotropins. Belongs to the GnRH family.
     
 0.570
H2M6E4_ORYLA
Uncharacterized protein.
     
  0.570
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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