Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
LOC101168305Endothelial cell-specific molecule 1. (181 aa)    
Predicted Functional Partners:
LOC101174288
Cadherin 5; Cadherins are calcium-dependent cell adhesion proteins.
      
 0.763
rbpj
Recombination signal binding protein for immunoglobulin kappa J region.
      
 0.638
apln
Apelin.
      
 0.598
LOC101163237
Growth differentiation factor 2.
    
 
 0.538
ENSORLP00000040294
Stathmin; Belongs to the stathmin family.
     
 0.506
scube2
Signal peptide, CUB domain, EGF-like 2.
     
 0.496
LOC101166812
O-acyltransferase like.
      
 0.494
faf1
Fas (TNFRSF6) associated factor 1.
      
 0.462
CHRNA1
Cholinergic receptor nicotinic alpha 1 subunit.
      
 0.444
CHRNA1-2
Cholinergic receptor nicotinic alpha 1 subunit.
      
 0.444
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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