Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC17A6Solute carrier family 17 member 6b. (581 aa)    
Predicted Functional Partners:
cntn2
Contactin 2.
   
 
 0.613
RIMS2
Regulating synaptic membrane exocytosis 2.
   
 
 0.605
ENSORLP00000026521
Uncharacterized protein.
     
 0.598
ENSORLP00000034554
C2 domain-containing protein.
     
 0.598
syt1
Synaptotagmin Ia.
   
 
 0.597
LOC101156534
Synaptotagmin Vb.
   
 
 0.554
LOC101157206
Uncharacterized protein.
   
 
 0.554
LOC101161806
Synaptotagmin IIa.
   
 
 0.554
LOC101162433
POU domain protein.
    
 
 0.528
LOC101173249
Zgc:92912.
     
 0.524
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.