STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101158198Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1853 aa)    
Predicted Functional Partners:
LOC101167500
Myosin, light chain 1, alkali; skeletal, fast.
   
 0.781
LOC101167617
Myosin, light chain 6, alkali, smooth muscle and non-muscle.
   
 0.610
LOC101160287
Uncharacterized protein.
   
 0.610
H2MTE5_ORYLA
Myosin, light chain 13.
   
 0.565
H2LQV6_ORYLA
Uncharacterized protein.
   
 0.563
mylpf
Myosin light chain, phosphorylatable, fast skeletal muscle a.
   
 0.561
LOC101159052
Uncharacterized protein.
   
 0.521
MYL2
Myosin, light chain 2b, regulatory, cardiac, slow.
   
 0.521
LOC101167032
Myosin, light chain 9a, regulatory.
   
 0.521
LOC101172386
EF-hand domain-containing protein.
   
 0.521
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.