Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
WDR37WD repeat domain 37. (494 aa)    
Predicted Functional Partners:
PACS1
Phosphofurin acidic cluster sorting protein 1a.
    
 
 0.954
LOC101168585
Phosphofurin acidic cluster sorting protein 2.
    
 
 0.842
LOC101172103
Uncharacterized protein.
    
 
 0.836
WDR63
WD repeat domain 63.
    
 0.684
ift140
Intraflagellar transport 140 homolog (Chlamydomonas).
   
 0.664
sgf29
SAGA complex associated factor 29.
    
 0.649
wdr48
WD repeat domain 48b.
    
 0.634
LOC101162575
Cytochrome P450, family 4, subfamily V, polypeptide 8; Belongs to the cytochrome P450 family.
    
 0.555
pes1
Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.530
rmnd5b
Required for meiotic nuclear division 5 homolog B.
    
 
 0.511
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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