STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
dnajc18DnaJ (Hsp40) homolog, subfamily C, member 18. (390 aa)    
Predicted Functional Partners:
hspa9
Heat shock protein 9; Belongs to the heat shock protein 70 family.
 
 0.896
hspa5
Uncharacterized protein; Belongs to the heat shock protein 70 family.
 
 0.794
dnajc8
DnaJ (Hsp40) homolog, subfamily C, member 8.
   
  
 0.793
hspa14
Heat shock protein 14; Belongs to the heat shock protein 70 family.
 
 0.708
hspa4l
Heat shock protein 4 like.
 
 0.695
sil1
SIL1 nucleotide exchange factor.
   
 
 0.690
dnajc28
DnaJ (Hsp40) homolog, subfamily C, member 28.
   
  
 0.690
pld6
Phospholipase D family, member 6.
      
 0.688
LOC101170553
NME/NM23 family member 8; Belongs to the NDK family.
  
 0.687
bag2
BCL2 associated athanogene 2.
   
 
 0.682
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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