Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
dcaf11DDB1- and CUL4-associated factor 11; May function as a substrate receptor for CUL4-DDB1 E3 ubiquitin-protein ligase complex; Belongs to the WD repeat LEC14B family. (542 aa)    
Predicted Functional Partners:
ddb1
Damage-specific DNA binding protein 1.
    
 0.995
dda1
DET1 and DDB1 associated 1.
    
  0.994
dcaf5
Ddb1 and cul4 associated factor 5.
    
0.988
COPS6
COP9 signalosome subunit 6.
    
 0.983
cops2
COP9 signalosome subunit 2.
    
 0.982
dcaf4
WD repeat domain 21.
     
 0.976
cops5
COP9 signalosome subunit 5.
    
  0.974
cul4b
Cullin 4B; Belongs to the cullin family.
    
 0.973
LOC101154851
Cullin 4A; Belongs to the cullin family.
    
 0.973
LOC101156715
DDB1 and CUL4 associated factor 8.
    
 0.973
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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