Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
arl6ip4ADP-ribosylation factor-like 6 interacting protein 4. (244 aa)    
Predicted Functional Partners:
zranb2
Zinc finger, RAN-binding domain containing 2.
    
 
 0.900
eif3j
Eukaryotic translation initiation factor 3 subunit J; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.
    
   0.888
gpalpp1
GPALPP motifs containing 1.
    
   0.804
C2cd3
Uncharacterized protein.
    
   0.760
sub1
General transcriptional coactivator.
   
  
 0.632
commd2
COMM domain containing 2.
      
 0.615
LOC101173218
Phosphatidylinositol-5-phosphate 4-kinase, type II, gamma b.
    
   0.608
LOC101169535
Phosphatidylinositol-5-phosphate 4-kinase, type II, gamma a.
    
   0.608
PIP4K2B
Phosphatidylinositol-5-phosphate 4-kinase type 2 beta.
    
   0.608
pip4k2a
Phosphatidylinositol-5-phosphate 4-kinase, type II, alpha a.
    
   0.608
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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