STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kpna4Importin subunit alpha; Belongs to the importin alpha family. (520 aa)    
Predicted Functional Partners:
cse1l
CSE1 chromosome segregation 1-like (yeast).
   
 0.971
nfkb1
Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1.
    
  0.935
LOC101158728
V-rel avian reticuloendotheliosis viral oncogene homolog A.
    
 0.934
kpna1
Importin subunit alpha; Belongs to the importin alpha family.
  
0.926
kpna3
Importin subunit alpha; Belongs to the importin alpha family.
  
  
 
0.900
kpnb1
Karyopherin (importin) beta 1.
   
 0.865
rcc1
Regulator of chromosome condensation 1.
   
 
 0.832
LOC101160447
RAN binding protein 2.
   
 
 0.736
nup153
Nucleoporin 153.
   
 
 0.671
NCBP1
Nuclear cap binding protein subunit 1.
   
 
 0.669
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.