Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
slc16a4Solute carrier family 16 member 4. (570 aa)    
Predicted Functional Partners:
veph1
Ventricular zone expressed PH domain-containing 1.
      
 0.706
ccdc117
Si:ch211-102c2.7.
      
 0.705
tmem68
Transmembrane protein 68.
      
 0.693
emb
Embigin.
   
 0.643
cbll1
Cbl proto-oncogene-like 1, E3 ubiquitin protein ligase.
      
 0.599
msantd4
Myb/SANT-like DNA-binding domain containing 4 with coiled-coils.
    
 
 0.470
cnot1
CCR4-NOT transcription complex, subunit 1.
    
 
 0.468
LOC101170744
G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.
      
 0.462
abcd4
ATP-binding cassette, sub-family D (ALD), member 4.
   
 
 0.415
hadhb
Hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta; Belongs to the thiolase-like superfamily. Thiolase family.
    
 
 0.400
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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