STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2LP85_ORYLARas homolog gene family, member Gd. (120 aa)    
Predicted Functional Partners:
LOC101169868
ELMO domain-containing protein.
    
 0.983
LOC101156647
Engulfment and cell motility 2.
    
 0.983
LOC101173701
Engulfment and cell motility 3.
    
 0.983
ARHGEF26
Rho guanine nucleotide exchange factor 26.
    
 0.968
LOC101162944
Ras homolog family member Gb.
  
  
 
0.901
ktn1
Kinectin 1.
   
 0.837
DOCK2
Dedicator of cytokinesis 2; Belongs to the DOCK family.
   
 0.792
dock1
Dedicator of cytokinesis 1; Belongs to the DOCK family.
   
 0.792
dock5
Dedicator of cytokinesis 5; Belongs to the DOCK family.
   
 0.792
dock4
Dedicator of cytokinesis 4b; Belongs to the DOCK family.
   
 0.790
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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