STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101173635Selenoprotein M. (147 aa)    
Predicted Functional Partners:
selenok
Selenoprotein K.
      
 0.652
selenof
Selenoprotein F.
      
 0.642
selenoo
Selenoprotein O1.
      
 0.638
selenot
Selenoprotein T; Belongs to the SelWTH family. Selenoprotein T subfamily.
      
 0.632
selenon
Selenoprotein N.
      
 0.614
GPX2
Glutathione peroxidase 2.
   
  
 0.603
selenoi
Selenoprotein I; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
      
 0.559
txnrd2
Thioredoxin reductase 2, tandem duplicate 1.
      
 0.559
txnl1
Thioredoxin-like 1.
      
 0.505
ENSORLP00000039854
Uncharacterized protein.
      
 0.489
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.