STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pck2Phosphoenolpyruvate carboxykinase 2 (mitochondrial). (643 aa)    
Predicted Functional Partners:
mdh1
Malate dehydrogenase.
  
 
 0.971
pc
Pyruvate carboxylase b.
   
 
 0.970
Mdh2
Malate dehydrogenase.
    
 0.963
LOC101159663
Enolase 1b, (alpha).
     
 0.963
eno1
Enolase 1a, (alpha).
     
 0.963
ENO2
Enolase 2.
     
 0.963
LOC101165077
Enolase 2.
     
 0.963
eno4
Enolase 4.
     
 0.956
mdhb
Malate dehydrogenase.
  
 
 0.955
LOC101161188
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 
 0.946
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.