Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101170788Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family. (247 aa)    
Predicted Functional Partners:
ENSORLP00000043209
Alpha-1-microglobulin/bikunin precursor.
   
 0.816
LOC101172288
Amyloid beta (A4) precursor protein b.
    
 0.802
LOC105353609
F2R like thrombin or trypsin receptor 3; Belongs to the G-protein coupled receptor 1 family.
    
 0.777
LOC101174360
Coagulation factor II (thrombin) receptor-like 1, tandem duplicate 2.
    
 0.746
LOC101167884
Coagulation factor II (thrombin) receptor-like 1, tandem duplicate 1.
    
 0.746
LOC101174546
Uncharacterized protein.
    
 0.729
LOC105354743
Coagulation factor II (thrombin) receptor-like 2.
    
  0.728
F2RL2
Coagulation factor II thrombin receptor like 2.
    
  0.728
spint1
Serine peptidase inhibitor, Kunitz type 1 a.
   
 0.726
LOC101167634
Coagulation factor II thrombin receptor.
    
  0.720
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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