Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101164658Uncharacterized protein. (242 aa)    
Predicted Functional Partners:
was
WASP actin nucleation promoting factor a.
   
 0.981
wasl
Uncharacterized protein.
   
 0.981
iqgap2
IQ motif containing GTPase activating protein 2.
   
 0.974
iqgap1
IQ motif containing GTPase activating protein 1.
   
 0.974
LOC101168439
Par-6 family cell polarity regulator alpha.
    
 0.963
pard6b
Par-6 partitioning defective 6 homolog beta (C. elegans).
    
 0.963
LOC101169467
Par-6 family cell polarity regulator gamma b.
    
 0.963
diaph3
Diaphanous-related formin 3.
   
 0.963
LOC101171411
Uncharacterized protein.
   
 0.941
LOC101162129
Rho GTPase activating protein 17b.
   
 0.939
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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