STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101164658Uncharacterized protein. (242 aa)    
Predicted Functional Partners:
was
WASP actin nucleation promoting factor a.
   
 0.980
wasl
Uncharacterized protein.
   
 0.980
iqgap2
IQ motif containing GTPase activating protein 2.
   
 0.968
iqgap1
IQ motif containing GTPase activating protein 1.
   
 0.968
LOC101168439
Par-6 family cell polarity regulator alpha.
    
 0.962
pard6b
Par-6 partitioning defective 6 homolog beta (C. elegans).
    
 0.962
LOC101169467
Par-6 family cell polarity regulator gamma b.
    
 0.962
diaph3
Diaphanous-related formin 3.
   
 0.955
LOC101171411
Uncharacterized protein.
   
 0.936
kdr
Kinase insert domain receptor (a type III receptor tyrosine kinase); Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.
   
 0.931
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.