STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101173735Potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4. (459 aa)    
Predicted Functional Partners:
H2MD80_ORYLA
Hyperpolarization activated cyclic nucleotide-gated potassium channel 4.
   
  
 0.566
calm3
Calmodulin-A; Calmodulin mediates the control of a large number of enzymes, ion channels and other proteins by Ca(2+). Among the enzymes to be stimulated by the calmodulin-Ca(2+) complex are a number of protein kinases and phosphatases.
    
 
 0.515
LOC100049422
Uncharacterized protein; Belongs to the calmodulin family.
    
 
 0.515
LOC100049419
Calmodulin.
    
 
 0.515
calm2
Calmodulin 2.
    
 
 0.515
LOC101174692
Potassium large conductance calcium-activated channel, subfamily M, alpha member 1a.
      
 0.448
kcnma1
Potassium calcium-activated channel subfamily M alpha 1.
      
 0.448
LOC101164024
ETS domain-containing protein.
   
  
 0.423
etv1
Ets variant 1.
   
  
 0.423
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.