STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101156443Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family. (326 aa)    
Predicted Functional Partners:
LOC101175393
Macrophage stimulating 1 receptor a.
    
 0.587
met
MET proto-oncogene, receptor tyrosine kinase.
    
 0.587
mst1r
Macrophage stimulating 1 receptor b.
    
 0.587
guca1b
Uncharacterized protein.
    
 
 0.537
LOC101158587
Uncharacterized protein.
    
 
 0.535
LOC101174925
Es1 protein.
      
 0.523
LOC101156698
Uncharacterized protein.
      
 0.501
ITPRID2
ITPR interacting domain containing 2.
      
 0.501
dapl1
Uncharacterized protein.
      
 0.499
LOC101164925
Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.
   
 0.494
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.