Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
smoxSpermine oxidase. (551 aa)    
Predicted Functional Partners:
sms
Spermine synthase.
     
 0.971
srm
Spermidine synthase; Belongs to the spermidine/spermine synthase family.
     
 0.971
LOC101156175
Amine oxidase.
     
 0.936
aldh7a1
Aldehyde dehydrogenase 7 family, member A1; Belongs to the aldehyde dehydrogenase family.
     
 0.907
LOC101156839
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
     
 0.903
LOC101157544
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
     
 0.903
LOC101160930
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
     
 0.903
aldh3b1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
     
 0.903
LOC101155544
Aldehyde dehydrogenase 9 family, member A1b; Belongs to the aldehyde dehydrogenase family.
     
 0.902
aldh9a1
4-trimethylaminobutyraldehyde dehydrogenase; Converts gamma-trimethylaminobutyraldehyde into gamma- butyrobetaine with high efficiency (in vitro). Can catalyze the irreversible oxidation of a broad range of aldehydes to the corresponding acids in an NAD-dependent reaction, but with low efficiency.
     
 0.902
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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