Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Atm | chek1 | ENSORLP00000026266 | ENSORLP00000007199 | Uncharacterized protein. | Checkpoint kinase 1; Belongs to the protein kinase superfamily. | 0.977 |
Atm | chek2 | ENSORLP00000026266 | ENSORLP00000032936 | Uncharacterized protein. | Checkpoint kinase 2. | 0.993 |
Atm | mdm2 | ENSORLP00000026266 | ENSORLP00000034706 | Uncharacterized protein. | MDM2 proto-oncogene. | 0.847 |
Atm | mdm4 | ENSORLP00000026266 | ENSORLP00000035882 | Uncharacterized protein. | MDM4 regulator of p53; Belongs to the MDM2/MDM4 family. | 0.777 |
Atm | sirt1 | ENSORLP00000026266 | ENSORLP00000017142 | Uncharacterized protein. | Deacetylase sirtuin-type domain-containing protein. | 0.479 |
Atm | tp53 | ENSORLP00000026266 | ENSORLP00000008031 | Uncharacterized protein. | Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression (By similarity); Belongs to the p53 family. | 0.996 |
LOC101160197 | LOC101163392 | ENSORLP00000003103 | ENSORLP00000026485 | E1A binding protein p300 a. | CREB binding protein a. | 0.929 |
LOC101160197 | adcy9 | ENSORLP00000003103 | ENSORLP00000010434 | E1A binding protein p300 a. | CREB binding protein b. | 0.929 |
LOC101160197 | mdm2 | ENSORLP00000003103 | ENSORLP00000034706 | E1A binding protein p300 a. | MDM2 proto-oncogene. | 0.808 |
LOC101160197 | mdm4 | ENSORLP00000003103 | ENSORLP00000035882 | E1A binding protein p300 a. | MDM4 regulator of p53; Belongs to the MDM2/MDM4 family. | 0.431 |
LOC101160197 | sirt1 | ENSORLP00000003103 | ENSORLP00000017142 | E1A binding protein p300 a. | Deacetylase sirtuin-type domain-containing protein. | 0.605 |
LOC101160197 | tp53 | ENSORLP00000003103 | ENSORLP00000008031 | E1A binding protein p300 a. | Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression (By similarity); Belongs to the p53 family. | 0.995 |
LOC101163392 | LOC101160197 | ENSORLP00000026485 | ENSORLP00000003103 | CREB binding protein a. | E1A binding protein p300 a. | 0.929 |
LOC101163392 | LOC101168870 | ENSORLP00000026485 | ENSORLP00000032567 | CREB binding protein a. | E1A binding protein p300 b. | 0.930 |
LOC101163392 | mdm2 | ENSORLP00000026485 | ENSORLP00000034706 | CREB binding protein a. | MDM2 proto-oncogene. | 0.582 |
LOC101163392 | mdm4 | ENSORLP00000026485 | ENSORLP00000035882 | CREB binding protein a. | MDM4 regulator of p53; Belongs to the MDM2/MDM4 family. | 0.431 |
LOC101163392 | sirt1 | ENSORLP00000026485 | ENSORLP00000017142 | CREB binding protein a. | Deacetylase sirtuin-type domain-containing protein. | 0.606 |
LOC101163392 | tp53 | ENSORLP00000026485 | ENSORLP00000008031 | CREB binding protein a. | Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression (By similarity); Belongs to the p53 family. | 0.994 |
LOC101168870 | LOC101163392 | ENSORLP00000032567 | ENSORLP00000026485 | E1A binding protein p300 b. | CREB binding protein a. | 0.930 |
LOC101168870 | adcy9 | ENSORLP00000032567 | ENSORLP00000010434 | E1A binding protein p300 b. | CREB binding protein b. | 0.928 |
page 1 of 4