STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
sordSorbitol dehydrogenase. (354 aa)    
Predicted Functional Partners:
xylb
Xylulokinase homolog (H. influenzae).
  
 
 0.943
khk
Ketohexokinase.
   
 
 0.938
LOC101167259
Aldo-keto reductase family 1, member B1 (aldose reductase), tandem duplicate 2.
  
 0.936
HK1
Hexokinase 1.
   
 
 0.931
LOC101164634
Hexokinase domain containing 1.
   
 
 0.931
LOC101156878
Hexokinase 1.
   
 
 0.931
LOC101166309
Hexokinase 2.
   
 
 0.931
LOC101165960
Phosphotransferase.
   
 
 0.931
dcxr
Dicarbonyl/L-xylulose reductase.
   
 
 0.920
tkfc
Triokinase/FMN cyclase.
  
 0.876
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.