STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
shbgSex hormone-binding globulin. (378 aa)    
Predicted Functional Partners:
LOC101162228
FXYD domain-containing ion transport regulator; Belongs to the FXYD family.
    
  0.714
atp5pf
ATP synthase-coupling factor 6, mitochondrial; Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain; Belongs to the eukaryotic ATPase subunit F6 family.
   
 
 0.574
gnrh3
GnRH-associated peptide 3; Stimulates the secretion of gonadotropins. Belongs to the GnRH family.
      
 0.560
gabpa
GA binding protein transcription factor subunit alpha.
   
  
 0.560
snw1
SNW domain containing 1.
    
 0.530
LOC101174651
Aromatase; Catalyzes the formation of aromatic C18 estrogens from C19 androgens.
   
  
 0.529
prl
Prolactin 2.
      
 0.527
LOC101172582
Prolactin.
      
 0.527
amh
Anti-muellerian hormone.
      
 0.508
LOC101171978
Si:ch211-140m22.7.
   
 
 0.502
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.