STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPEF2Serine/threonine-protein phosphatase with EF-hands. (717 aa)    
Predicted Functional Partners:
onecut2
One cut domain family member.
   
  
 0.811
WDR7
WD repeat domain 7.
    
 
 0.754
fech
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
   
 
 0.754
ccng2
Cyclin G2; Belongs to the cyclin family.
    
 0.732
ppp4r2
Protein phosphatase 4, regulatory subunit 2b.
    
 0.644
LOC101162291
Uncharacterized protein.
    
 0.644
LOC101159996
CYCLIN domain-containing protein; Belongs to the cyclin family.
    
 0.635
igbp1
Immunoglobulin (CD79A) binding protein 1.
    
 
 0.631
LOC101157461
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
   
 0.619
LOC101167467
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
   
 0.619
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.