STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101170499Cytochrome P450, family 4, subfamily F, polypeptide 3; Belongs to the cytochrome P450 family. (529 aa)    
Predicted Functional Partners:
LOC101167098
Cytochrome P450, family 2, subfamily U, polypeptide 1; Belongs to the cytochrome P450 family.
  
0.946
cyp2p3
Cytochrome P450 2P3; Belongs to the cytochrome P450 family.
  
0.934
pla2g4c
Uncharacterized protein.
     
 0.918
alox5
Arachidonate 5-lipoxygenase a.
   
 0.916
LOC101174953
Arachidonate 12-lipoxygenase.
   
 0.916
lta4h
Leukotriene A(4) hydrolase; Belongs to the peptidase M1 family.
    
 0.915
LOC101163757
Zgc:152891.
   
 0.914
LOC101165239
Uncharacterized protein.
   
 0.914
PLA2G12B
Phospholipase A2 group XIIB.
   
 
  0.911
pla2g1b
Phospholipase A(2).
     
 0.910
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.