STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
myrfMyelin regulatory factor. (1113 aa)    
Predicted Functional Partners:
spo11
SPO11 initiator of meiotic double stranded breaks.
    
 
 0.677
LOC101157800
Proteolipid protein 1b.
      
 0.588
LOC101171500
Proteolipid protein 1a.
      
 0.588
gigyf1
GRB10 interacting GYF protein 1a.
      
 0.566
LOC101162931
Cardiomyopathy associated 5.
    
 
 0.566
trappc12
Trafficking protein particle complex 12.
      
 0.562
smg6
SMG6 nonsense mediated mRNA decay factor.
      
 0.556
mak
Male germ cell-associated kinase.
    
 
 0.523
ICK
Intestinal cell kinase.
    
 
 0.523
MOK
MOK protein kinase; Belongs to the protein kinase superfamily.
    
 
 0.523
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.