Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
myrfMyelin regulatory factor. (1113 aa)    
Predicted Functional Partners:
spo11
SPO11 initiator of meiotic double stranded breaks.
    
 
 0.831
mak
Male germ cell-associated kinase.
    
 
 0.704
ICK
Intestinal cell kinase.
    
 
 0.704
MOK
MOK protein kinase; Belongs to the protein kinase superfamily.
    
 
 0.704
tmem98
Transmembrane protein 98.
    
 
 0.696
LOC101171500
Proteolipid protein 1a.
   
  
 0.623
LOC101170857
GRAM domain-containing protein.
    
   0.604
LOC101162931
Cardiomyopathy associated 5.
    
 
 0.603
gigyf1
GRB10 interacting GYF protein 1a.
      
 0.601
klhl26
Kelch-like family member 26.
      
 0.600
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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