STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nlgn3Neuroligin 3a. (851 aa)    
Predicted Functional Partners:
nrxn1
Neurexin 1.
   
 0.972
LOC101169749
Uncharacterized protein.
   
 0.959
LOC101167491
Neurexin 1.
   
 0.958
rabif
RAB interacting factor.
      
 0.678
H2MJT0_ORYLA
Uncharacterized protein.
      
 0.675
MDGA2
MAM domain containing glycosylphosphatidylinositol anchor 2.
   
 0.614
LOC101156134
Neurexin 3b.
   
 0.610
serpini1
Serpin peptidase inhibitor, clade I (neuroserpin), member 1; Belongs to the serpin family.
   
 0.591
LOC101165088
Uncharacterized protein.
   
 0.586
LOC101166255
Uncharacterized protein.
   
 0.586
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.