Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101164402Syntaxin binding protein 2; Belongs to the STXBP/unc-18/SEC1 family. (615 aa)    
Predicted Functional Partners:
LOC101170749
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.880
snap25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.880
stx2
Syntaxin 2b; Belongs to the syntaxin family.
   
 0.869
LOC101167681
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
   
 0.859
LOC101164408
Syntaxin 3A; Belongs to the syntaxin family.
   
 0.857
LOC101157106
Syntaxin 1B; Belongs to the syntaxin family.
   
 0.843
LOC101175011
Syntaxin 1A (brain); Belongs to the syntaxin family.
   
 0.843
Vamp3
Vesicle-associated membrane protein 3 (cellubrevin).
    
 0.816
vamp4
Vesicle-associated membrane protein 4.
    
 0.800
exoc7
Exocyst complex component 7; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.
   
 0.789
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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