STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kmt2bLysine (K)-specific methyltransferase 2Bb. (3798 aa)    
Predicted Functional Partners:
rbbp5
Retinoblastoma binding protein 5.
    
 0.920
men1
Multiple endocrine neoplasia I.
    
 0.904
ash2l
Ash2 like, histone lysine methyltransferase complex subunit.
    
 0.904
wdr5
WD repeat domain 5.
   
 0.899
LOC101157666
LEDGF domain-containing protein.
  
 
 0.843
ash1l
Uncharacterized protein.
   
 
 0.837
LOC105357989
LEDGF domain-containing protein.
  
 
 0.836
adcy9
CREB binding protein b.
   
 0.829
LOC101163392
CREB binding protein a.
   
 0.829
LOC101160197
E1A binding protein p300 a.
   
 0.828
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.