STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
adgrl4Adhesion G protein-coupled receptor L4; Belongs to the G-protein coupled receptor 2 family. (738 aa)    
Predicted Functional Partners:
hsd17b14
Hydroxysteroid (17-beta) dehydrogenase 14.
      
 0.749
cd63
Tetraspanin.
    
   0.658
myct1
Myc target 1a.
   
  
 0.642
miga1
Mitoguardin 1.
      
 0.609
zzz3
Zinc finger, ZZ-type containing 3.
      
 0.606
mospd1
Motile sperm domain containing 1.
    
 
 0.580
c19h10orf88
Si:rp71-19m20.1.
      
 0.551
H2LX96_ORYLA
Uncharacterized protein.
      
 0.549
utp3
UTP3 small subunit processome component.
      
 0.544
ccdc117
Si:ch211-102c2.7.
      
 0.538
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.