Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101175665Uncharacterized protein; Belongs to the CD36 family. (518 aa)    
Predicted Functional Partners:
cd63
Tetraspanin.
     
 0.922
LOC101155208
Scavenger receptor class B, member 2c; Belongs to the CD36 family.
  
  
 
0.910
LOC101169982
Tetraspanin.
     
 0.910
zenzai
Zenzai; Belongs to the CD36 family.
  
  
 
0.909
LOC101161189
Uncharacterized protein.
    
 0.554
LOC101161439
Uncharacterized protein.
    
 0.554
H2MBB3_ORYLA
Vitellogenin domain-containing protein.
    
 0.528
LOC101158990
Apolipoprotein Bb, tandem duplicate 2.
    
 0.528
LOC101156458
Apolipoprotein Ba.
    
 0.528
gba
Glucosylceramidase.
   
 
 0.505
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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