Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
LOC101164395Solute carrier family 5 member 8, like; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (606 aa)    
Predicted Functional Partners:
pdzd11
PDZ domain containing 11.
    
 0.591
LOC101158273
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.568
LOC101170020
MFS domain-containing protein.
      
 0.559
slc16a1
Solute carrier family 16 member 1a.
      
 0.508
hnf1b
HNF1 homeobox Ba.
   
  
 0.501
slc22a18
Solute carrier family 22 member 18.
   
  
 0.476
sycp1
Uncharacterized protein.
      
 0.472
LOC101161007
Solute carrier family 22 member 13a.
   
  
 0.463
LOC101161268
Solute carrier family 22 member 13a.
   
  
 0.463
iyd
Iodotyrosine deiodinase.
      
 0.442
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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