Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101161914Lipase, member Ia. (449 aa)    
Predicted Functional Partners:
pla2g15
Phospholipase A2, group XV.
      
 0.535
LOC101172993
Uncharacterized protein.
    
 0.489
LOC101159830
Patatin-like phospholipase domain containing 7b.
    
 0.489
prxl2b
Peroxiredoxin like 2B.
      
 0.464
LOC101174136
Fat storage inducing transmembrane protein 1, like.
      
 0.464
LOC101156001
Lipase; Belongs to the AB hydrolase superfamily. Lipase family.
   
 
 0.446
LOC101170553
NME/NM23 family member 8; Belongs to the NDK family.
    
 0.419
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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