Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
zranb2Zinc finger, RAN-binding domain containing 2. (355 aa)    
Predicted Functional Partners:
rpl32
Ribosomal protein L32.
      
 0.914
fosb
FBJ murine osteosarcoma viral oncogene homolog B.
   
  
 0.914
nfkbil1
Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1.
    
   0.902
arl6ip4
ADP-ribosylation factor-like 6 interacting protein 4.
    
 
 0.900
H2LBV2_ORYLA
RRM domain-containing protein.
   
 0.833
cd59
CD59 molecule (CD59 blood group).
      
 0.811
luc7l3
LUC7-like 3 pre-mRNA splicing factor.
   
   0.762
LOC101163805
Serine and arginine rich splicing factor 11.
   
 0.757
LOC101171612
Uncharacterized protein.
   
 0.757
ENSORLP00000032445
RRM domain-containing protein.
   
 0.757
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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