STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aplp1Amyloid beta (A4) precursor-like protein 1. (704 aa)    
Predicted Functional Partners:
Sdhaf1
Succinate dehydrogenase complex assembly factor 1; Belongs to the complex I LYR family.
      
 0.828
LOC101156270
Uncharacterized protein.
    
 0.825
sorl1
Sortilin-related receptor, L(DLR class) A repeats containing.
    
 0.742
NCSTN
Nicastrin.
    
 0.688
hlcs
Holocarboxylase synthetase.
      
 0.641
nfkbid
ANK_REP_REGION domain-containing protein.
    
 0.631
prodh2
Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate.
      
 0.598
tnfrsf21
Tumor necrosis factor receptor superfamily, member 21.
    
 
 0.582
ENSORLP00000032656
Uncharacterized protein.
   
 0.576
pitrm1
Pitrilysin metallopeptidase 1.
    
 
 0.564
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.