STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vkorc1Vitamin K epoxide reductase complex, subunit 1. (167 aa)    
Predicted Functional Partners:
ggcx
Gamma-glutamyl carboxylase.
   
 
 0.966
nqo1
Flavodoxin_2 domain-containing protein.
     
 0.920
vkorc1l1
Vitamin K epoxide reductase complex, subunit 1-like 1.
  
  
 
0.902
H2MUB4_ORYLA
Flavodoxin_2 domain-containing protein.
     
  0.900
pitx1
Homeobox protein.
      
 0.679
trpt1
tRNA phosphotransferase 1.
   
  
 0.651
dclre1a
C2H2-type domain-containing protein.
   
  
 0.630
LOC101173208
Phosphoinositide phospholipase C.
      
 0.601
LOC101172964
Phosphoinositide phospholipase C.
      
 0.601
pros1
Protein S.
   
  
 0.571
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.