STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc35b3Solute carrier family 35 member B3. (374 aa)    
Predicted Functional Partners:
slc35c1
Solute carrier family 35 member C1.
   
  
 0.734
glce
Glucuronic acid epimerase b.
      
 0.718
b3gat3
Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase; Belongs to the glycosyltransferase 43 family.
   
  
 0.717
SLC35D3
Solute carrier family 35 member D3.
   
  
 0.697
slc35c2
Solute carrier family 35 member C2.
      
 0.694
slc35a5
Solute carrier family 35 member A5.
   
  
 0.693
LOC101161430
Protein-tyrosine sulfotransferase; Catalyzes the O-sulfation of tyrosine residues within acidic motifs of polypeptides, using 3'-phosphoadenylyl sulfate (PAPS) as cosubstrate; Belongs to the protein sulfotransferase family.
   
 
 0.686
chid1
Chitinase domain containing 1; Belongs to the glycosyl hydrolase 18 family.
      
 0.611
nipa2
NIPA magnesium transporter 2.
      
 0.598
tmem144
Transmembrane protein 144b.
      
 0.585
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.