Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC101157892Zgc:92313; Belongs to the peptidase S1 family. (308 aa)    
Predicted Functional Partners:
H2MJP6_ORYLA
Uncharacterized protein.
     
 0.742
emg1
EMG1 N1-specific pseudouridine methyltransferase.
      
 0.585
LOC101170553
NME/NM23 family member 8; Belongs to the NDK family.
    
 0.503
LOC101160155
Membrane associated guanylate kinase, WW and PDZ domain containing 3b.
   
  
 0.475
LOC101159504
Uncharacterized protein.
   
  
 0.475
agt
Angiotensinogen; Belongs to the serpin family.
   
 0.416
serpinf2
SERPIN domain-containing protein; Belongs to the serpin family.
   
 0.400
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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