STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101166157Peroxiredoxin 4. (257 aa)    
Predicted Functional Partners:
txndc5
Thioredoxin domain containing 5; Belongs to the protein disulfide isomerase family.
  
 0.941
erp44
Endoplasmic reticulum protein 44.
  
 0.925
prdx5
Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily.
   
 0.903
pdia6
Protein disulfide isomerase family A, member 6; Belongs to the protein disulfide isomerase family.
  
 0.896
ENSORLP00000032688
Sulfiredoxin.
   
 0.887
LOC101170553
NME/NM23 family member 8; Belongs to the NDK family.
  
 0.886
txn
Thioredoxin; Belongs to the thioredoxin family.
  
 0.876
txn2
Thioredoxin 2.
  
 0.803
cat
Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide.
  
 
 0.716
dnajc10
DnaJ (Hsp40) homolog, subfamily C, member 10.
  
 0.689
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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