STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101175555Tyrosine-protein kinase. (1112 aa)    
Predicted Functional Partners:
LOC101173855
Signal transducer and activator of transcription.
   
 0.911
ifngr1l
Fibronectin type-III domain-containing protein.
     
 0.909
LOC101162184
Signal transducer and activator of transcription.
   
 0.897
stat3
Signal transducer and activator of transcription.
   
 0.896
LOC101154761
Signal transducer and activator of transcription.
   
 0.888
LOC101161521
Signal transducer and activator of transcription.
   
 0.881
LOC101163082
Signal transducer and activator of transcription.
   
 0.878
LOC101168657
Signal transducer and activator of transcription.
   
 0.878
LOC101163579
Erythropoietin receptor.
    
 0.816
socs1
Suppressor of cytokine signaling 1.
   
 0.786
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.