STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NACC2NACC family member 2. (584 aa)    
Predicted Functional Partners:
nanog
Homeobox domain-containing protein.
    
 0.677
LOC100049520
POU domain protein.
    
 0.631
polr2c
Polymerase (RNA) II (DNA directed) polypeptide C.
    
 0.513
rps2
Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
   
 0.437
gadd45gip1
Growth arrest and DNA-damage-inducible, gamma interacting protein 1.
    
 
 0.421
LOC101170553
NME/NM23 family member 8; Belongs to the NDK family.
    
 0.419
LOC101169625
Uncharacterized protein.
    
 0.415
sall4
Spalt-like transcription factor 4.
    
 0.410
sumo1
Small ubiquitin-related modifier.
    
 0.409
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.