Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101164099ZP domain-containing protein. (778 aa)    
Predicted Functional Partners:
1-sf
ZP domain-containing protein.
   
 0.642
LOC101164783
ZP domain-containing protein.
   
 
 0.621
LOC101166143
Growth differentiation factor 9.
   
 0.554
LOC100049333
Zona pellucida glycoprotein 3f, tandem duplicate 1.
  
  
 0.515
bmp15
Bone morphogenetic protein 15.
   
 0.415
CFAP61
Cilia and flagella associated protein 61.
    
 0.415
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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