STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101174272-2PRELI domain containing 1a. (210 aa)    
Predicted Functional Partners:
triap1
TP53 regulated inhibitor of apoptosis 1.
    
 0.989
LOC101164398
PRELI/MSF1 domain-containing protein.
    
 0.760
prelid3a
PRELI domain containing 3A.
    
 0.760
LOC101165878
PRELI domain containing 3.
    
 0.760
tamm41
Phosphatidate cytidylyltransferase, mitochondrial; Catalyzes the formation of CDP-diacylglycerol (CDP-DAG) from phosphatidic acid (PA) in the mitochondrial inner membrane. Required for the biosynthesis of the dimeric phospholipid cardiolipin, which stabilizes supercomplexes of the mitochondrial respiratory chain in the mitochondrial inner membrane.
    
 
 0.613
stard7
StAR-related lipid transfer (START) domain containing 7.
   
 0.592
phb
Prohibitin.
   
 
 0.559
crls1
Cardiolipin synthase 1.
   
 
 0.526
ccdc69
Uncharacterized protein.
      
 0.525
ptpmt1
Uncharacterized protein.
      
 0.495
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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