STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rapsnReceptor-associated protein of the synapse, 43kD. (412 aa)    
Predicted Functional Partners:
MUSK
Muscle associated receptor tyrosine kinase.
   
  
 0.680
LOC101171274
Uncharacterized protein.
      
 0.672
LOC101166281
Neuralized E3 ubiquitin protein ligase 1Aa.
      
 0.672
neurl1b
Neuralized E3 ubiquitin protein ligase 1B.
      
 0.672
agrn
Agrin.
      
 0.669
LOC101166241
Cholinergic receptor, nicotinic, epsilon.
   
 
 0.539
DOK7
Docking protein 7.
      
 0.536
LOC101155825
Docking protein 7.
      
 0.536
hspg2
Heparan sulfate proteoglycan 2.
      
 0.487
LOC101157251
Cholinergic receptor, nicotinic, beta 1 (muscle).
   
 
 0.486
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.