STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2LQL8_ORYLASi:ch211-81n22.1. (264 aa)    
Predicted Functional Partners:
LOC101154783
Zgc:152830.
     
  0.900
lap3
Leucine aminopeptidase 3.
     
  0.900
naa35
N(alpha)-acetyltransferase 35, NatC auxiliary subunit.
   
 0.804
snrpe
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
 0.695
LOC101160998
Uncharacterized protein.
      
 0.674
LOC101159739
Aminopeptidase.
     
  0.650
LOC101173145
Aminopeptidase.
     
  0.650
LOC101170261
Aminopeptidase.
     
  0.650
LOC101171894
Aminopeptidase.
     
  0.650
naa38
N(alpha)-acetyltransferase 38, NatC auxiliary subunit.
    
 0.493
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.